Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015953457.1_cds_XP_016492598.1_82788
CDS Infomation

[gene=LOC107812079] [db_xref=GeneID:107812079] [protein=ubiquitin carboxyl-terminal hydrolase 14-like] [protein_id=XP_016492598.1] [location=complement(join(1202..1328,1399..1456,1531..1729,2345..2425,3015..3047,3120..3174,6235..6312,6445..6501,6572..6705,7152..7246,9041..9377,9484..9596,9685..9856,10693..10788))] [gbkey=CDS]
Sequence

ATGGAGCTCCTTCGATCGAACCTCCCTCGTGTTCGAATTCCTGAACCAACAAATCGTATC
TTCAAGCACGAATGCTGCATTTCTTTTGATACTCCCAAATCTGAGGGCGGGCTGTTTGTT
GATATGAACACCTTTCTTGCATTTGGAAGGGATTATGTAGGTTGGAACTACGAGAAGACT
GGGAACCCAGTTTATTTGCACATAAAGCAAACGAAGAAGACAATTGCTGAAGATAGACCA
TCAAAAAGACCCACGCTTTTGGCTATAGGTATTGATGGAGGGTTTGATAATAGTGATCCC
CAGTATGAAGAAAGCTATGAAATTGTTATATTGCCGGATTACATAGCCCTTCCTTTCCCT
TCTGTGGAGTTGCCTGAGAAGGTAAGGTTGGCTGTTGATGCTACTTTAATGGCTGAAGCT
GCTGAAAGGAAAGAGCAAGTTGCTTCATGGACTGCTGACAAGAAGCTTGTCAGTAAATAT
GCCATGGATCTGCAGCAGCTCGACAATGGTGTTGTTGTTCCTCCAATGGGTTGGAAATGT
GCCAAGTGTGACAAGACCGAAAATCTCTGGCTGAATCTAACCGATGGATCTATCCTTTGT
GGTAGGAGAAATTGGGATGGAACTGGTGGTAATGACCATGCCATTGACCACTACAAAGAA
GCTGGTTACCCCCTTGCCGTAAAGCTAGGGACCATAACTGCTGATTTGGAGGGGGCAGAT
GTTTTCTCCTACCCAGAGGATGAAAGTATTCTTGACCCACTTTTAGGACAGCATCTGGCA
CATTTTGGTATCGACTTCTCATCATTGCAAAAGACGGAAATGACTACTGCTGAAAGAGAA
CTTGACCAAAATATTAATTATGATTGGAATCGTATTCAAGAAACTGGTCAAGATGTTGAA
CCACTTTTTGGACCTGGTTATACTGGACTAGTCAATTTGGGTAATAGTTGCTACTTGGCC
GCGACAATGCAGGTTGTATTCTCAATGCGTCCCTTCTGTTCTCGGTACTATGTGGAGCAA
AGTCTCAAAGCAGCTTTCAGTGTGGCTCCTGCTGATCCTACTGTAGACCTTAACATGCAG
CTAACAAAGTTAGCTCATGGCTTGCTTTCTGGAAAATATTCTGTTCCTGTTCTGGAGGAT
GATGACAAGTCAAGTGCTCCAAGTTCACTGAAACAGGAGGGAATCCGTCCCCGCATGTTC
AAGTCAGTTATTGCTGCTAGCCACCCTGAATTTTCTACTATGAGACAACAGGATGCACTA
GAGTTTTTCCTACATTTCATTGATCAAGTTGATCGGATGAATATCGGGAACCCTAATATT
GATCCTTCGAGGAGCTTCAAGTTTGGAATTGAAGAACGCCTCCAATGTCCCTCAGGAAAA
GTGGCCTACAACGGGAGGAAAGATTATATTCTTTCTCTTAATATTCCTTTAGAAAGGGTG
GTAAATAAAAGAGAGCTAGCAGACTTTCAAAAGTTAAAGGCTGAGAGAGCTGCAGAAGGA
AAGGACGTGTCTACAGATGAAATTGTCCGCCCAAGGGTTCCATTAAAGGATTGCCTGGAT
TGTTTTTCAGCTCCTGAGGAGGTGCATGATTTTTACAGCACGGCTTTAAAGGCTAGGACA
ACTGCAATCAAGTAA

Peptide Sequence

PEP ID

XP_016492598.1
PEP Infomation

PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like [Nicotiana tabacum]
Sequence

MELLRSNLPRVRIPEPTNRIFKHECCISFDTPKSEGGLFVDMNTFLAFGRDYVGWNYEKT
GNPVYLHIKQTKKTIAEDRPSKRPTLLAIGIDGGFDNSDPQYEESYEIVILPDYIALPFP
SVELPEKVRLAVDATLMAEAAERKEQVASWTADKKLVSKYAMDLQQLDNGVVVPPMGWKC
AKCDKTENLWLNLTDGSILCGRRNWDGTGGNDHAIDHYKEAGYPLAVKLGTITADLEGAD
VFSYPEDESILDPLLGQHLAHFGIDFSSLQKTEMTTAERELDQNINYDWNRIQETGQDVE
PLFGPGYTGLVNLGNSCYLAATMQVVFSMRPFCSRYYVEQSLKAAFSVAPADPTVDLNMQ
LTKLAHGLLSGKYSVPVLEDDDKSSAPSSLKQEGIRPRMFKSVIAASHPEFSTMRQQDAL
EFFLHFIDQVDRMNIGNPNIDPSRSFKFGIEERLQCPSGKVAYNGRKDYILSLNIPLERV
VNKRELADFQKLKAERAAEGKDVSTDEIVRPRVPLKDCLDCFSAPEEVHDFYSTALKART
TAIK

Transcript Sequence

Gene sequence data has not been registered.